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Results Found: 4
  • Histone H1 loss drives lymphoma by disrupting 3D chromatin architecture

    Authors
    Yusufova, Nevin
    Teater, Matt
    Cesarman, Ethel
    Melnick, Ari M.
    1 more author(s)...
    Description

    Summary from the GEO: "Linker histone H1 proteins bind to nucleosomes and cause chromatin compaction, although little is known about their biological functions. Histone H1 (HIST1H1B-E) mutations are highly recurrent in B-cell lymphomas and are present in solid tumors, but their cancer relevance and mechanism are unknown. Here we report that lymphoma-associated H1 alleles are genetic driver mutations...

    Subject
    B-Lymphocytes
    Gene Silencing
    Genes, Tumor Suppressor
    Histones
    Lymphoma
    Sequence Analysis
    Access Rights
    Free to All
  • SMYD5 regulates H4K20me3-marked heterochromatin to safeguard ES cell self-renewal and prevent spurious differentiation

    Authors
    Kidder, Benjamin L.
    Description

    Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Summary: This SuperSeries is composed of the SubSeries GSE94033 and GSE94085. Article summary that correlates to the GEO: "Epigenetic regulation of chromatin states is thought to control the self-renewal and differentiation of embryonic stem (ES) cells. However, the roles of repressive...

    Subject
    Chromatin Immunoprecipitation Sequencing
    DNA Methylation
    Gene Silencing
    Histone Code
    Histone-Lysine N-Methyltransferase
    Methyltransferases
    RNA Interference
    Tumor Suppressor Proteins
    Access Rights
    Free to All
  • SMYD5 regulates H4K20me3-marked heterochromatin to safeguard ES cell self-renewal and prevent spurious differentiation [ChIP-Seq]

    Authors
    Kidder, Benjamin L.
    Zhao, Keji
    Description

    Summary from the GEO:"Epigenetic regulation of chromatin states is thought to control the self-renewal and differentiation of embryonic stem (ES) cells. However, the roles of repressive histone modifications such as trimethylated histone lysine 20 (H4K20me3) in pluripotency and development are largely unknown. Here, we show that the histone lysine methyltransferase SMYD5 mediates H4K20me3 at heterochromatin...

    Subject
    Chromatin Immunoprecipitation Sequencing
    DNA Methylation
    Gene Silencing
    Histone Code
    Histone-Lysine N-Methyltransferase
    Methyltransferases
    RNA Interference
    Tumor Suppressor Proteins
    Access Rights
    Free to All
  • SMYD5 regulates H4K20me3-marked heterochromatin to safeguard ES cell self-renewal and prevent spurious differentiation [RNA-Seq]

    Authors
    Kidder, Benjamin L.
    Zhao, Keji
    Description

    Summary from the GEO: "Epigenetic regulation of chromatin states is thought to control the self-renewal and differentiation of embryonic stem (ES) cells. However, the roles of repressive histone modifications such as trimethylated histone lysine 20 (H4K20me3) in pluripotency and development are largely unknown. Here, we show that the histone lysine methyltransferase SMYD5 mediates H4K20me3 at heterochromatin...

    Subject
    Chromatin Immunoprecipitation Sequencing
    DNA Methylation
    Gene Silencing
    Histone Code
    Histone-Lysine N-Methyltransferase
    Methyltransferases
    RNA Interference
    Tumor Suppressor Proteins
    Access Rights
    Free to All